The detailed information of tRNA gene sequence


Sequence ID>WENV180093238
Genome IDMPMF02308456
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1131
End posion on genome 1055
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tcctcccgtc
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
agcgaaaggc
Secondary structure (Cloverleaf model)
>WENV180093238	fMet	CAT
                   c      ACCA agcgaaaggc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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