The detailed information of tRNA gene sequence


Sequence ID>WENV180093246
Genome IDMPMF02308759
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 784
End posion on genome 686
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tagatcttgt
tRNA gene sequence 
GGGGGCGGATGGGTCCCGGTGGGTCCCTTGGTCTTCAAAACTAATGGCCCCGGCCCTTTC
GGTCGGGGCGGTGGGTTCGACTCCCTCCCGCTCCCGCCA
Downstream region at tRNA end position 
ccggcgaaca
Secondary structure (Cloverleaf model)
>WENV180093246	SeC	TCA
                   t      GCCA ccggcgaaca
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C          T C
                    A     C T C C C     A
      C C C        T      |   | | |     G
    G       T G G G       G T G G G     C
    G       + + | |                 T T
    T       G T C C
      G G          C     TGGCCCCGGCCCTTTCGGTCGGGGCG
                    T - A
                    T - A
                    G + T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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