The detailed information of tRNA gene sequence


Sequence ID>WENV180093279
Genome IDMPMF02310813
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2361
End posion on genome 2272
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaagtttta
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGACGGGTTAAACCGT
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gaactcttgt
Secondary structure (Cloverleaf model)
>WENV180093279	Ser	TGA
                   a      GCCA gaactcttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGACGGGTTAAACCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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