The detailed information of tRNA gene sequence


Sequence ID>WENV180093302
Genome IDMPMF02312651
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1331
End posion on genome 1257
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcccacggtc
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGGAGAGCACTCGTTTCACATGCGAGGGGTCAGTGGTTCAATCC
CACCCGCGCCCACCA
Downstream region at tRNA end position 
ccgtagccgg
Secondary structure (Cloverleaf model)
>WENV180093302	Val	CAC
                   c      ACCA ccgtagccgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     C C A C C     A
        G A        A        | | | |     A
      C     C T C G       A G T G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    T + G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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