The detailed information of tRNA gene sequence


Sequence ID>WENV180093316
Genome IDMPMF02313337
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1204
End posion on genome 1279
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aatcgataga
tRNA gene sequence 
GGGCGGGTAGCTCAGCTGGGAGAGCACCGGCCTTACAAGCCGGGGGTCACAGGTTCGAGC
CCTGTTCCGCCTACCA
Downstream region at tRNA end position 
tcggtccgat
Secondary structure (Cloverleaf model)
>WENV180093316	Val	TAC
                   a      ACCA tcggtccgat
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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