The detailed information of tRNA gene sequence


Sequence ID>WENV180093338
Genome IDMPMF02314656
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2163
End posion on genome 2070
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaataatttt
tRNA gene sequence 
GGGAATGATTAGGAGGCTGGTGCCCCTCGTGGTCTTCAAAACCATTGGGATCTACACAAC
AGATCCGGTGAGTTCGATTCTCACGCGTTCCCGCta
Downstream region at tRNA end position 
gaaattcaga
Secondary structure (Cloverleaf model)
>WENV180093338	SeC	TCA
                   t      GCta gaaattcaga
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     C A C T C     A
      C G G        T      | | | | |     G
    T       A G G A       G T G A G     C
    G         | | |                 T T
    G       C C C T
      T G C        C     TGGGATCTACACAACAGATCCG
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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