The detailed information of tRNA gene sequence


Sequence ID>WENV180093380
Genome IDMPMF02317391
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 113
End posion on genome 39
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gctcaccggc
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGGAGAGCACCGTCTTCACACGGCGGGGGTCGCTGGTTCAATCC
CAGCCGCGCCCACCA
Downstream region at tRNA end position 
ccgaaaagct
Secondary structure (Cloverleaf model)
>WENV180093380	Val	CAC
                   c      ACCA ccgaaaagct
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     C G A C C     A
        G A        A      | | | | |     A
      C     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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