The detailed information of tRNA gene sequence


Sequence ID>WENV180093382
Genome IDMPMF02317463
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1034
End posion on genome 1130
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcgtgcactc
tRNA gene sequence 
GGAGGTGGGTAGGGCCGGGTGGCTCTCGCGGTCTTCAAAATCGTCGTGGGGCGCTGGTCA
GCGTCCTAGGTGGGTTCGACTCCCATGCACCTCCGCCg
Downstream region at tRNA end position 
ttggtccaga
Secondary structure (Cloverleaf model)
>WENV180093382	SeC	TCA
                   c      GCCg ttggtccaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    G     T A C C C     A
      G C C        T      + | | | |     G
    G       G G G A       G T G G G     C
    G       | + | |                 T T
    T       C T C T
      G G          C     CGTGGGGCGCTGGTCAGCGTCCTAG
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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