The detailed information of tRNA gene sequence


Sequence ID>WENV180093385
Genome IDMPMF02317684
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 4211
End posion on genome 4287
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaatgcgcta
tRNA gene sequence 
AGGAGTGTAGCTCAGTTTGGCAGAGCGCCGGTCTCCAAAACCGTAGGTCGGGGGTTCGAG
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
ggctggcggc
Secondary structure (Cloverleaf model)
>WENV180093385	Trp	CCA
                   a      GCCA ggctggcggc
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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