The detailed information of tRNA gene sequence


Sequence ID>WENV180093454
Genome IDMPMF02322224
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1632
End posion on genome 1722
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgccggccg
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGCTAATCCCCC
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
atattgccgg
Secondary structure (Cloverleaf model)
>WENV180093454	Ser	GCT
                   g      GCCA atattgccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGCTAATCCCCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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