The detailed information of tRNA gene sequence


Sequence ID>WENV180093462
Genome IDMPMF02322534
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 374
End posion on genome 299
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaatttaat
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGCTGCGGGTTCAAGT
CCTGCCACTCCTGCCA
Downstream region at tRNA end position 
aaggattgaa
Secondary structure (Cloverleaf model)
>WENV180093462	Trp	CCA
                   t      GCCA aaggattgaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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