The detailed information of tRNA gene sequence


Sequence ID>WENV180093484
Genome IDMPMF02323645
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1281
End posion on genome 1378
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcacctcggg
tRNA gene sequence 
GGGAGTGGATCCGTGCTGGTGTGCGGCCCGGTCTTCAAAGCCGGTAGGGCCCCGTGAACA
GCGGGGCCGGTGGGTTCGATTCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
ttttgaacat
Secondary structure (Cloverleaf model)
>WENV180093484	SeC	TCA
                   g      GCCA ttttgaacat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      T C G        T      + | | | |     G
    G       T G C C       G T G G G     C
    G       + | | |                 T T
    T       G C G G
      G T          C     TAGGGCCCCGTGAACAGCGGGGCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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