The detailed information of tRNA gene sequence


Sequence ID>WENV180093492
Genome IDMPMF02323827
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1561
End posion on genome 1637
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
attttttatt
tRNA gene sequence 
GGGCCGGTCGTTCAGCCTGGTAGGATGCGCCCATGGCATGGGTGAGGTCAAGGGTTCAAA
TCCCTTCCGGTCCACCA
Downstream region at tRNA end position 
ttttttaata
Secondary structure (Cloverleaf model)
>WENV180093492	Ala	GGC
                   t      ACCA ttttttaata
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        C      | | | | |     A
    C       C T T G       A A G G G     C
    T       | + | +                 T T
    G       G G A T
      G T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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