The detailed information of tRNA gene sequence


Sequence ID>WENV180093549
Genome IDMPMF02328189
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 17533
End posion on genome 17626
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaacatagaa
tRNA gene sequence 
GGAGAGTTGGGTGAGTTTGGTTTAAACCAGCAGGTTGCTAACTTGTCGTGCGTCGAAAGA
TGTACCGTGGGTTCGAATCCCACACTCTCCGCCA
Downstream region at tRNA end position 
ttagtataaa
Secondary structure (Cloverleaf model)
>WENV180093549	Ser	GCT
                   a      GCCA ttagtataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  T         G T G G       G T G G G     C
  G           | | |                 T T
  G         A A C C
    T T T A        A     CGTGCGTCGAAAGATGTACC
                    G + T
                    C - G
                    A - T
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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