The detailed information of tRNA gene sequence


Sequence ID>WENV180093584
Genome IDMPMF02330615
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 154
End posion on genome 243
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtgtccatgc
tRNA gene sequence 
GGAGAGGTGCGAGAGCGGCTTAATCGGCACGCCTGGAAAGCGTGTGTACCGGCAACGGTA
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gacccgtccg
Secondary structure (Cloverleaf model)
>WENV180093584	Ser	GGA
                   c      GCCA gacccgtccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G C G G G     C
    G         | | |                 T T
    C       A T C G
      T T A        G     TGTACCGGCAACGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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