The detailed information of tRNA gene sequence


Sequence ID>WENV180093645
Genome IDMPMF02335002
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 272
End posion on genome 348
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgccgcatag
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAGGTCGCCGGTTCGAG
TCCCGTCACTCCCGCCA
Downstream region at tRNA end position 
ttgccttcca
Secondary structure (Cloverleaf model)
>WENV180093645	Asp	GTC
                   g      GCCA ttgccttcca
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + |   | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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