The detailed information of tRNA gene sequence


Sequence ID>WENV180093655
Genome IDMPMF02335547
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 252
End posion on genome 350
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gggcacacat
tRNA gene sequence 
GGGAGCGGATGGGAGCCTGGTGGCCTCCGCGGATTTCAAATCCGTTGCGGTGTCGGGAGA
CCGGCGCTGGGTGGGTTCGATTCCCACACGTTCCCGCCA
Downstream region at tRNA end position 
gaaaccatcc
Secondary structure (Cloverleaf model)
>WENV180093655	SeC	TCA
                   t      GCCA gaaaccatcc
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      C C G        T      | | | | |     G
    T       A G G G       G T G G G     C
    G         | + |                 T T
    G       C C T C
      T G G        C     TGCGGTGTCGGGAGACCGGCGCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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