The detailed information of tRNA gene sequence


Sequence ID>WENV180093664
Genome IDMPMF02335949
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 658
End posion on genome 569
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccactctttt
tRNA gene sequence 
GGAGGGATGGCAGAGCGGCTGAATGCACCGGTCTTGAAAACCGGCAAGGGCTAATACCCT
TCCAGGGTTCAAATCCCTGTCCCTCCACCA
Downstream region at tRNA end position 
ctcaaacctg
Secondary structure (Cloverleaf model)
>WENV180093664	Ser	TGA
                   t      ACCA ctcaaacctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     A
    G       G A C G       C A G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        A     CAAGGGCTAATACCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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