The detailed information of tRNA gene sequence


Sequence ID>WENV180093748
Genome IDMPMF02342148
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3720
End posion on genome 3621
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcgtgggttc
tRNA gene sequence 
GGGGGAGCGGAGGGGGCCCGGTGGCTCTCGCGGTCTTCAAAACCGTTGCGGGGCGGCCCG
CGCCGTCCTGGGTGGGTTCGACTCCCATGCGCTCCCGCCA
Downstream region at tRNA end position 
cacttcaccc
Secondary structure (Cloverleaf model)
>WENV180093748	SeC	TCA
                   c      GCCA cacttcaccc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     A   G
                     G - C
                     C - G          T C
                    G     T A C C C     A
    C C G G        G      + | | | |     G
  C         G G G A       G T G G G     C
  G         | + | |                 T T
  G         C T C T
    T G G          C     TGCGGGGCGGCCCGCGCCGTCCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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