The detailed information of tRNA gene sequence


Sequence ID>WENV180093801
Genome IDMPMF02346487
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2063
End posion on genome 1989
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aagaaaaacc
tRNA gene sequence 
GGATCCGTCGTCTAGCTTGGTTTGGATACCGCACTCACACTGCGGGGGTCAAGGGTTCAA
ATCCCTTCGGATCCAttt
Downstream region at tRNA end position 
taactactgc
Secondary structure (Cloverleaf model)
>WENV180093801	Val	CAC
                   c      Attt taactactgc
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    T C G A        C      | | | | |     A
  T         T C T G       A A G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          A     GGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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