The detailed information of tRNA gene sequence


Sequence ID>WENV180093820
Genome IDMPMF02348022
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 17026
End posion on genome 17115
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gataatactt
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTTAAGGTGCTCGCTTGGAAAGCGAGTGAGGGTTAACGCCCT
CCACGGGTTCGAATCCCGTCCTCTCCGCCA
Downstream region at tRNA end position 
attttcactt
Secondary structure (Cloverleaf model)
>WENV180093820	Ser	GGA
                   t      GCCA attttcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       G T C G       A C G G G     C
    G         + | +                 T T
    T       A G G T
      T T A        G     TGAGGGTTAACGCCCTCC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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