The detailed information of tRNA gene sequence


Sequence ID>WENV180093824
Genome IDMPMF02348279
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1230
End posion on genome 1135
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgccaatatt
tRNA gene sequence 
GGGGATGATTGCGTGGCTGGTGCCCGCCGCGGTCTTCAACACCGTTGAGACGGCGGAGAG
CCGTTTGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
gaattcaaaa
Secondary structure (Cloverleaf model)
>WENV180093824	SeC	TCA
                   t      GCCA gaattcaaaa
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       T G C G       C T G G G     C
    G         | | |                 T T
    G       C C G C
      T G C        C     TGAGACGGCGGAGAGCCGTTTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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