The detailed information of tRNA gene sequence


Sequence ID>WENV180093826
Genome IDMPMF02348417
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1319
End posion on genome 1230
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcgccccact
tRNA gene sequence 
GGAAGGGTGCCGGAGTGGTCGAACGGGGCGCTCTCGAAAAGCGTTGTGCGAGCAATCGCA
CCGGGGGTTCGAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
tccttcatca
Secondary structure (Cloverleaf model)
>WENV180093826	Ser	CGA
                   t      GCCA tccttcatca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGCGAGCAATCGCACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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