The detailed information of tRNA gene sequence


Sequence ID>WENV180093980
Genome IDMPMF02358533
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 17487
End posion on genome 17413
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatcatagtt
tRNA gene sequence 
GGCGAGGTAGCTCAGTTGGTGAGAGCGTCGGATTCATAACCCGGAGGCCGGGAGTTCAAA
TCTCCCTCTCGCTACat
Downstream region at tRNA end position 
taaatatcga
Secondary structure (Cloverleaf model)
>WENV180093980	Met	CAT
                   t      ACat taaatatcga
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T G A        G     AGGCC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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