The detailed information of tRNA gene sequence


Sequence ID>WENV180093983
Genome IDMPMF02358702
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 260
End posion on genome 352
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgggcggcaa
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTCGAAGGCGACGGTTTGCTAAACCGTTATAGGGTGTAAAGCT
CTATCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
tacctccgtc
Secondary structure (Cloverleaf model)
>WENV180093983	Ser	GCT
                   a      GCCA tacctccgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGGTGTAAAGCTCTATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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