The detailed information of tRNA gene sequence


Sequence ID>WENV180094031
Genome IDMPMF02362332
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 272
End posion on genome 347
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ttgacaatta
tRNA gene sequence 
GGGCCTGTAGCTCAGGGGTTAGAGCAGTCGGCTCATAACCGATTGGTCGTAGGTTCAAAT
CCTACCAGGCCCACCA
Downstream region at tRNA end position 
aagaaatatt
Secondary structure (Cloverleaf model)
>WENV180094031	Ile2	CAT
                   a      ACCA aagaaatatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C A T C C     A
      G G A        A      | | | | |     A
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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