The detailed information of tRNA gene sequence


Sequence ID>WENV180094053
Genome IDMPMF02364140
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3085
End posion on genome 3009
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aaggaaaaaa
tRNA gene sequence 
GGGCCAGTAGCTCAGTTGGTTAGAGCAGTCGACTCATAATCGATCGGTCGCAGGTTCAAG
TCCTGCCTGGCCCACCA
Downstream region at tRNA end position 
tagatttgaa
Secondary structure (Cloverleaf model)
>WENV180094053	Ile2	CAT
                   a      ACCA tagatttgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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