The detailed information of tRNA gene sequence


Sequence ID>WENV180094095
Genome IDMPMF02366152
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1552
End posion on genome 1642
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagctccatt
tRNA gene sequence 
GGAGAGGTGCCCGAGCGGTCGAAGGGGCACGCCTGGAAAGCGTGTGTGCGGTACTCCCGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ccctacgttc
Secondary structure (Cloverleaf model)
>WENV180094095	Ser	GGA
                   t      GCCA ccctacgttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    T       A G G G
      C G A        G     TGTGCGGTACTCCCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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