The detailed information of tRNA gene sequence


Sequence ID>WENV180094106
Genome IDMPMF02367281
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3681
End posion on genome 3588
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atttattcaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTCCGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAAGGGCCTAACGG
CTCTTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
agtcttaacc
Secondary structure (Cloverleaf model)
>WENV180094106	Ser	GCT
                   a      GCCA agtcttaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T C G A        G     TAAGGGCCTAACGGCTCTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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