The detailed information of tRNA gene sequence


Sequence ID>WENV180094122
Genome IDMPMF02367559
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 510
End posion on genome 436
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
nnnnnncttt
tRNA gene sequence 
GGGCCGGTAGCTCAGTCGGTTAGAGCAAGCGACTCATAATCGCTGGGTCGGGGGTTCGAG
TCCCTCCCGGCCTACgt
Downstream region at tRNA end position 
ccctatgggc
Secondary structure (Cloverleaf model)
>WENV180094122	Ile2	CAT
                   t      ACgt ccctatgggc
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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