The detailed information of tRNA gene sequence


Sequence ID>WENV180094141
Genome IDMPMF02368480
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 915
End posion on genome 829
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggttcaacg
tRNA gene sequence 
GGAGCGGTGGCTGAGTGGTCGAAAGCGCGGGTTTGCTAAATCCGTGATCTCGTGAGGGAT
CCGCAGGTTCGAATCCTGTCCGCTCCGttt
Downstream region at tRNA end position 
gaaagctggg
Secondary structure (Cloverleaf model)
>WENV180094141	Ser	GCT
                   g      Gttt gaaagctggg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGATCTCGTGAGGGATCC
                    C - G
                    G - C
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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