The detailed information of tRNA gene sequence


Sequence ID>WENV180094165
Genome IDMPMF02369970
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 86
End posion on genome -1
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatgcttttc
tRNA gene sequence 
GGAGGGGTGGGTGAGTGGCTTAAACCAGTACATTGCTAATGTGCCGTACGCGAAAGTGTA
CCGAGGGTTCGAATCCCTCTCCCTCCNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180094165	Ser	GCT
                   c      NNnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACGCGAAAGTGTACC
                    G - C
                    T + G
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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