The detailed information of tRNA gene sequence


Sequence ID>WENV180094254
Genome IDMPMF02375502
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 12402
End posion on genome 12328
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ataaataggg
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGCGAGGCTCATAACCTCGAGGTCGCAGGTTCGAA
TCCTGTCCCCGCAACtt
Downstream region at tRNA end position 
ttttattttt
Secondary structure (Cloverleaf model)
>WENV180094254	fMet	CAT
                   g      ACtt ttttattttt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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