The detailed information of tRNA gene sequence


Sequence ID>WENV180094273
Genome IDMPMF02377063
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 290
End posion on genome 380
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgtcgccaa
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATCGCGCAGGCTTGGAAAGCTTGTAAAGGTTAATAGCCT
TTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gactatttta
Secondary structure (Cloverleaf model)
>WENV180094273	Ser	GGA
                   a      GCCA gactatttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     TAAAGGTTAATAGCCTTTC
                    C - G
                    A - T
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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