The detailed information of tRNA gene sequence


Sequence ID>WENV180094275
Genome IDMPMF02377158
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 698
End posion on genome 622
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gccgtctcgg
tRNA gene sequence 
GGGGTGGTAGTTCAATTGGTTAGAGCACCGGCCTGTCACGCCGGAAGTTGCGGGTTCGAG
TCCCGTCCGCCCCGCCA
Downstream region at tRNA end position 
caagctcccg
Secondary structure (Cloverleaf model)
>WENV180094275	Asp	GTC
                   g      GCCA caagctcccg
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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