The detailed information of tRNA gene sequence


Sequence ID>WENV180094296
Genome IDMTBK01000231
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 795
End posion on genome 885
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atcggtccct
tRNA gene sequence 
GGAGAGGTGCCGGAGCCAGGTCGATCGGGCCTCCCTGCTAAGGAGGTGTGGGGGCAACCT
CACCGTGGGTTCGAATCCCACCCTCTCCGCCg
Downstream region at tRNA end position 
aatgtcatgc
Secondary structure (Cloverleaf model)
>WENV180094296	Ser	GCT
                   t      GCCg aatgtcatgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     G
  A         G G C C       G T G G G     C
  G         + | | |                 T T
  G         T C G G
    T C G A        G     TGTGGGGGCAACCTCACC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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