The detailed information of tRNA gene sequence


Sequence ID>WENV180094298
Genome IDMTBK01000292
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 690
End posion on genome 598
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcggcagtct
tRNA gene sequence 
GGAGAGATGCCCGAGAGGCCGAAGGGGCGCGATTGGAAATCGCGTGTACCACCAAAAGTG
GTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gaaaaggccg
Secondary structure (Cloverleaf model)
>WENV180094298	Ser	GGA
                   t      GCCA gaaaaggccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TGTACCACCAAAAGTGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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