The detailed information of tRNA gene sequence


Sequence ID>WENV180094299
Genome IDMTBK01000374
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 343
End posion on genome 430
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctgcccggc
tRNA gene sequence 
GGAAAGGTGGCAGAGTGGACGATTGCGACGGTCTTGAAAACCGTTGAGGGTGCAAGCCCT
CCGGGGGTTCGAATCCCCCTCTTTCCGCgt
Downstream region at tRNA end position 
taggtctcgg
Secondary structure (Cloverleaf model)
>WENV180094299	Ser	TGA
                   c      GCgt taggtctcgg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        G     TGAGGGTGCAAGCCCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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