The detailed information of tRNA gene sequence


Sequence ID>WENV180094300
Genome IDMTBK01000392
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 131
End posion on genome 39
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcgccgtga
tRNA gene sequence 
GGATGGGTGGCCGAGCGGCTGAAGGCACTCGCCTGCTAAGCGAGTATGGGCCCTAAAGGC
CCATCGAGGGTTCGAATCCCTCCCCATCCGCCA
Downstream region at tRNA end position 
gcaaatcaga
Secondary structure (Cloverleaf model)
>WENV180094300	Ser	GCT
                   a      GCCA gcaaatcaga
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TATGGGCCCTAAAGGCCCATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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