The detailed information of tRNA gene sequence


Sequence ID>WENV180094301
Genome IDMTBK01000545
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 120
End posion on genome 195
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taattatttt
tRNA gene sequence 
ACGGGAGTGGCTCAATTGGCAGAGCACCGGACTCCAAATCCGGCGGTTGTGGGTTCGATT
CCTACCTCCCGTGCCA
Downstream region at tRNA end position 
gtaaacaagc
Secondary structure (Cloverleaf model)
>WENV180094301	Trp	CCA
                   t      GCCA gtaaacaagc
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     C A T C C     A
      T A A        G      | | + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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