The detailed information of tRNA gene sequence


Sequence ID>WENV180094305
Genome IDMTBK01000842
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2053
End posion on genome 2126
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gtttcttgat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAGT
CCTCCCTCCGCTACtg
Downstream region at tRNA end position 
aaagaggacg
Secondary structure (Cloverleaf model)
>WENV180094305	fMet	CAT
                   t      ACtg aaagaggacg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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