The detailed information of tRNA gene sequence


Sequence ID>WENV180094310
Genome IDMTBK01000984
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 489
End posion on genome 413
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cccgacaggt
tRNA gene sequence 
CGGGGCGTAGCGCAGACTGGTAGCGCGTTTGCTTGGGGTGCAAAAGGTCCCGGGTTCAAA
TCCCGGCGCCCCGACCA
Downstream region at tRNA end position 
ctttccccct
Secondary structure (Cloverleaf model)
>WENV180094310	Pro	GGG
                   t      ACCA ctttccccct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G G C C C     A
      A G A        A      | | | | |     A
    C       C G C G       C C G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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