The detailed information of tRNA gene sequence


Sequence ID>WENV180094316
Genome IDMTBK01001519
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 552
End posion on genome 627
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caaacctcgt
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGCCTCCCTTGCACGGAGGAGGTCCTCGGTTCGAAT
CCGTGCGGCTCCACCA
Downstream region at tRNA end position 
aagaaaacct
Secondary structure (Cloverleaf model)
>WENV180094316	Ala	TGC
                   t      ACCA aagaaaacct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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