The detailed information of tRNA gene sequence


Sequence ID>WENV180094318
Genome IDMTBK01001546
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1443
End posion on genome 1517
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttaaaagtaa
tRNA gene sequence 
GGTTTGTTAACTCAAAGGTAGAGTAATTGCTTGTCACGCAATAAGTTATGGGTTCGAGTC
CCATACAGACCGCCA
Downstream region at tRNA end position 
aatttaatgg
Secondary structure (Cloverleaf model)
>WENV180094318	Asp	GTC
                   a      GCCA aatttaatgg
                     G - C
                     G - C
                     T - A
                     T + G
                     T - A
                     G - C
                     T - A          T G
                    T     T A C C C     A
        A A        A      | | | | |     G
      A     C T C A       A T G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     AAGTT
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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