The detailed information of tRNA gene sequence


Sequence ID>WENV180094322
Genome IDMTBK01001707
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 284
End posion on genome 358
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gacagatttc
tRNA gene sequence 
GGCGAGGTAGCCAAGTGGTTAGGCAACGGTTTGCAAAACCGTCCAACGCCGGTTCGAATC
CGGTCCTCGCCTCCA
Downstream region at tRNA end position 
aaaggccatg
Secondary structure (Cloverleaf model)
>WENV180094322	Cys	GCA
                   c      TCCA aaaggccatg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G G C C     A
        G A        A      + | | | |     G
      T     A C C G       G C C G G     C
      G       | | |                 T T
      G     A G G C
        T T        A     CCAAC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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