The detailed information of tRNA gene sequence


Sequence ID>WENV180094324
Genome IDMTBK01001811
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1070
End posion on genome 1143
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttaatatac
tRNA gene sequence 
AGGTCACTAGCTCAATTGGCAGAGCATCGGTCTCCAAAACCGAGGGTTGGGGGTTCAAGT
CCCTCGTGGCCTGCat
Downstream region at tRNA end position 
taacctcctg
Secondary structure (Cloverleaf model)
>WENV180094324	Trp	CCA
                   c      GCat taacctcctg
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     C - G          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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