The detailed information of tRNA gene sequence


Sequence ID>WENV180094325
Genome IDMTBK01001940
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4886
End posion on genome 4959
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aattcttgat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAGT
CCTCCCTCCGCTACaa
Downstream region at tRNA end position 
caaaaaagag
Secondary structure (Cloverleaf model)
>WENV180094325	fMet	CAT
                   t      ACaa caaaaaagag
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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