The detailed information of tRNA gene sequence


Sequence ID>WENV180094331
Genome IDMTBK01002339
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 372
End posion on genome 447
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttaaatcat
tRNA gene sequence 
GGTCCAGTAGTGTAGCGGTTAACATGCCTCCCTGTCACGGAGGAGATCGCGGGTTCGATC
CCCGTCTGGACCGCCA
Downstream region at tRNA end position 
ttctatgcag
Secondary structure (Cloverleaf model)
>WENV180094331	Asp	GTC
                   t      GCCA ttctatgcag
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C          C T
                    T     T G C C C     A
      C G A        A      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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