The detailed information of tRNA gene sequence


Sequence ID>WENV180094333
Genome IDMTBK01002539
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 153
End posion on genome 229
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atcacctttT
tRNA gene sequence 
CGGGGTGTAGCTCAGCTTGGCTAGAGCGTCTGGTTTGGGACCAGAAGGCCGAAGGTTCGA
ATCCTTTCACCCCGATtt
Downstream region at tRNA end position 
ttgccgtagg
Secondary structure (Cloverleaf model)
>WENV180094333	Pro	TGG
                   T      ATtt ttgccgtagg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T T C C     A
    T C G A        A      + | | | |     G
  T         C T C G       G A A G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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