The detailed information of tRNA gene sequence


Sequence ID>WENV180094335
Genome IDMTBK01002754
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1355
End posion on genome 1440
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
caccatccgt
tRNA gene sequence 
GCCGGTGTGGTGGAATGGCAGACGCGACGGACTCAAAATCCGTTGGTAGCGATACCGTGT
CGGTTCAAGTCCGACCACCGGCACCA
Downstream region at tRNA end position 
cccagggact
Secondary structure (Cloverleaf model)
>WENV180094335	Leu	CAA
                   t      ACCA cccagggact
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     A
    G       G G T G       G T C G G     C
    G         | + |                 T T
    C       A C G C
      A G          G     TGGTAGCGATACCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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